天然产物研究与开发 ›› 2023, Vol. 35 ›› Issue (12): 2049-2060.doi: 10.16333/j.1001-6880.2023.12.004

• 研究论文 • 上一篇    下一篇

驼血蛋白中胰脂肪酶抑制肽的计算机模拟评估

伊   丽1,2*,孙茹欣1,何   静1,2,明   亮1,2,张秀荣3,吉日木图1,2   

  1. 1内蒙古农业大学食品科学与工程学院 乳品生物技术与工程教育部重点实验室,呼和浩特 010018;2内蒙古中哈骆驼研究院,阿拉善 737300;3阿拉善右旗农业技术推广中心,阿拉善 750306
  • 出版日期:2023-12-28 发布日期:2023-12-27
  • 基金资助:
    高层次人才引进科研启动项目(NDYB2018-48);双一流学科创新团队建设(NDSC2018-14);国家重点研发计划(2020YFE0203300)

In silico evaluation of pancreatic lipase inhibitory peptide in camel blood protein

YI Li1,2*,SUN Ru-xin1,HE Jing1,2,MING Liang1,2,ZHANG Xiu-rong3,Jirimutu1,2   

  1. 1Key Laboratory of Dairy Biotechnology and Bioengineering,Ministry of Education,College of Food Science and Engineering,Inner Mongolia Agriculture University,Hohhot 010018,China;2 Inner Mongolia China-Kazakhstan Camel Research Institute,Alxa 737300,China;3Alxa Right Banner Agricultural Technology Promotion Center,Alxa 750306,China
  • Online:2023-12-28 Published:2023-12-27

摘要:

本研究利用中性蛋白酶对驼血蛋白进行酶解,对其酶解工艺、胰脂肪酶(PDB code:1ETH)抑制活性、多肽分子特征以及分子结合模式进行研究,以期获得高活性的胰脂肪酶抑制肽。结果表明:中性蛋白酶在酶用量为5%、酶解pH为7.0、酶解温度为55 ℃、酶解时间为3 h的最佳工艺条件下酶解驼血蛋白所获多肽的胰脂肪酶抑制率为4213%。使用LC-MS/MS共鉴定出533种肽段,肽兰克评分大于0.8的有8条肽段。其中ALERMFLGF、GQPAVPVRF、WDPSKVPPR三条肽段与胰脂肪酶结合显著。通过AMBER 19进行分子动力学模拟,结果显示,三条肽段均能与胰脂肪酶活性口袋残基结合,主要通过静电作用、氢键和疏水相互作用抑制其活性。其中GQPAVPVRF结合能最高且具有更多的结合位点而成为最具潜能的胰脂肪酶抑制肽。本研究为开发新型PL抑制剂肽提供了参考,为驼血蛋白的高价值利用提供了新途径。

关键词: 驼血蛋白, 胰脂肪酶, 生物活性肽, 分子动力学模拟

Abstract:

In this study,camel blood proteins were enzymatically digested using neutral protease,and the enzymatic process,pancreatic lipase (PL,PDB code:1ETH) inhibitory activity,molecular characteristics of the peptides,and molecular binding patterns were investigated with the aim of PL inhibitory peptides.The optimal processing conditions were 5% neutral protease,pH was 7.0,enzymolysis temperature was 55 ℃,and enzymolysis time was 3 h.Under optimized conditions,the PL inhibition rate reached 42.13%.A total of 533 peptides were identified using LC-MS/MS,of which eight peptides had a PeptideRanker score greater than 0.8.Among them,ALERMFLGF,GQPAVPVRF,and WDPSKVPPR exhibited significant binding with pancreatic lipase.Molecular dynamic simulation by AMBER 19 showed that all of them could interact with the residues in the active pocket residues of PL,primarily through electrostatic interactions,hydrogen bonding and hydrophobic interactions,thereby inhibiting its activity.Among them,CGPAVPVRF stands out the most potent PL inhibitor peptide,exhibiting the highest binding energy and possessing a greater number of binding sites.The study not only provides a reference for the development of novel PL inhibitor peptides,but also offers a new avenue for the high-value utilization of camel blood proteins.

Key words: camel blood protein, pancreatic lipase, bioactive peptide, molecular dynamic simulation

中图分类号:  TS251.9