天然产物研究与开发 ›› 2022, Vol. 34 ›› Issue (12): 2018-2025.doi: 10.16333/j.1001-6880.2022.12.004

• 研究论文 • 上一篇    下一篇

基于分子对接及酶抑制动力学探究红景天提取物体外α-葡萄糖苷酶抑制活性

王丽萍1,2,高彩雯1,2,冯海月1,2,曾嵩玉1,2,陈士恩1*   

  1. 1西北民族大学生命科学与工程学院;2西北民族大学生物研究中心 中国-马来西亚国家联合实验室,兰州 730124
  • 出版日期:2022-12-28 发布日期:2022-12-29
  • 基金资助:
    教育部“创新团队发展计划”(IRT_17R88);西北民族大学预防兽医学创新团队项目(1110130143)

In vitro α-glucosidase inhibitory activity of Rhodiola crenulata extract based on molecular docking and enzyme inhibition kinetics

WANG Li-ping1,2,GAO Cai-wen1,2,FENG Hai-yue1,2,ZENG Song-yu1,2,CHEN Shi-en1*   

  1. 1School of Life Sciences and Engineering,Northwestern Minzu University;2China-Malaysia National Joint Laboratory,Biomedical Research Center,Northwestern Minzu University,Lanzhou 730124,China
  • Online:2022-12-28 Published:2022-12-29

摘要:

为探究红景天提取物体外α-葡萄糖苷酶抑制活性及具有抑制作用的主要活性物质。该研究首先构建体外α-葡萄糖苷酶抑制体系,测定其抑制活性,通过酶抑制动力学判断抑制类型,然后采用UHPLC-QE-MS、分子对接进一步探索提取物中抑制α-葡萄糖苷酶的主要活性物质。结果表明,红景天提取物对α-葡萄糖苷酶具有较好的抑制效果,IC50为1.538 mg/mL,抑制类型为竞争与非竞争性混合可逆抑制;UHPLC-QE-MS共检测出1 245种化合物,其中脂肪酸类、萜类及其衍生物、黄酮及类黄酮类为化合物最多的3类,分别有107种、85种、66种,其次还鉴定出酚类、氨基酸类、糖类等多类物质;分子对接显示,20种相对含量较高的化合物中11种可与α-葡萄糖苷酶结合,(+)-表儿茶素结合能(-17.08 kJ/mol)最低、结合活性最佳,咖啡酸形成氢键最多为5个,分别与His-515、Arg-437、Glu-432、His-348残基相连,咖啡酸、L-苹果酸、槲皮素和酪醇具有相同结合位点Arg-437。研究旨为天然α-葡萄糖苷酶抑制剂的开发以及红景天资源利用提供了基础研究。

关键词: 红景天, α-葡萄糖苷酶, 分子对接, 超高效液相色谱-质谱, 酶抑制动力学

Abstract:

The purpose of this study was to explore the in vitro α-glucosidase inhibitory activity of Rhodiola crenulata extract and the main active substances with inhibitory effect.An in vitro α-glucosidase inhibitory system was constructed,its inhibitory activity was measured,and the type of inhibition was determined by enzyme inhibition kinetics.Then,ultra-high performance liquid chromatography-mass spectrometry (UHPLC-QE-MS) and molecular docking were used to further explore the main compounds in the extract that inhibit the activity of α-glucosidase.The results showed that the extract of R. crenulata had a good inhibitory effect on α-glucosidase,with IC50 of 1.538 mg/mL,which was a mixed reversible inhibition type of competitive and non-competitive.A total of 1 245 compounds were detected by UHPLC-QE-MS,among which fatty acids,terpenes and their derivatives,flavonoids were the three most common compounds,with 107,85 and 66 compounds,respectively.Secondly,a variety of substances such as phenols,amino acids,and sugars were identified.Molecular docking showed that 11 of the 20 compounds with relatively high content had binding to α-glucosidase.The (+)-epicatechin binding energy (-17.08 kJ/mol) was the lowest and binding activity was the best.Caffeic acid forms up to 5 hydrogen bonds,which are connected to His-515,Arg-437,Glu-432,and His-348 residues respectively.Caffeic acid,L-malic acid,quercetin and tyrosol have the same binding site Arg-437.This study provided basic research for the development of natural α-glucosidase inhibitors and the utilization of R. crenulata resources.

Key words: Rhodiola crenulata, α-glucosidase, molecular docking, UHPLC-QE-MS, enzyme inhibition kinetics

中图分类号:  R285.5